Q1: Explain non covalent interaction of water
molecule?
Ans: The non-covalent interaction are different from the covalent interaction because they do not share electron with another. Due to the formation of non-covalent interaction energy released. Intermolecular forces are non-covalent interactions that occur between different molecules, rather than between different atoms of the same molecules.
Ans: The non-covalent interaction are different from the covalent interaction because they do not share electron with another. Due to the formation of non-covalent interaction energy released. Intermolecular forces are non-covalent interactions that occur between different molecules, rather than between different atoms of the same molecules.
a) Hydrogen
bonds between water molecules: When
hydrogen atom attaches to a highly electronegative atoms such as oxygen or
nitrogen the resulting covalent bond is polar. Hydrogen atom acquire a slight
positive charge. Such hydrogen atom can then participate in a hydrogen bonding. Hydrogen bond is weak interaction to a
negatively charged atom in another molecule. Water molecules forms four
neighboring water molecules. The most common hydrogen bonds are those between
water molecules, but other hydrogen bonds also play a critical role in the
structure of proteins and DNA.
b) Hydrogen
bonds between solute molecules:
hydrogen bonds are also found between an electronegative atoms (O2,
N) and a hydrogen atom covalently bonded to another atom in same or another
molecule. Hydrogen bonds are strongest when hydrogen atom and the two atoms
that share this bond are in straight line. Thus hydrogen bonds are highly
directional and capable of holding two hydrogen bonded molecules or group in a
specific geometric arrangement. Note that in biological systems, the electronegative
atom (hydrogen acceptor) is usually oxygen or nitrogen. The distance between to
hydrogen bonded atoms are varies from 0.26 to 0.31 nm.
c) Interaction
between water and charged solute:
Water is a polar solvent. Compounds that dissolve readily in water are hydrophilic.
d) Interaction
between water and non-polar gases: Biologically
important gases CO2, O2 and N2 are non-polar.
Non polar nature of these gases and decrease in entropy when they enter into a
solution make them very poorly soluble in water. Some organism have water
soluble carrier protein which are involve in transportation of these gases.
e) Interaction
between water and non-polar compounds: Nonpolar
compounds such as Benzene and Hexane are hydrophobic and they interfere with boding
among water molecules. Amphipathic compounds have region that are polar and
nonpolar. The forces that hold nonpolar regions of the molecules together are
called hydrophobic interaction.
f) Van der
Waals Interactions: Van der Waals
interactions are weak, non-specific, interatomic interaction. These occur when
any two uncharged atoms are 3 to 4 Aº apart. Basic of Van der Waal interaction
is that distribution of charge around an atom changes with time.
Role of non-covalent interaction: Macro molecules such as proteins, DAN, RAN involves
many sites of different non-covalent interaction have large effect on these
macro molecules. Non covalent interaction are important in protein folding.
These interaction are important in binding of an antigen to specific antibody.
These interaction are involved in catalytic power of enzyme. Non covalent
interaction are important in biding of a hormone to its receptor. These are
important binding of neurotransmitter to its cellular receptor.
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